miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|124681737|gb|EH776477.1|EH776477 GGCGGGGATACATAATTTTAGATGAAACTTTCATCTCTCAACTGCTGCTGTTCTTCTTCCTCAATTTCCAGATTTATTTC
ATCATCATCATCGTCATCATCGTTATGTATACTGCTAATCTTCTAGGTTTTGGTCTTGCCGTCTCTTCCAGTGCATTCAT
CGGATCAAGCTTCATCATTAAAAAGAAAGGTCTCCAAAGGGCTGGTGCTTCTGGTACTCGTGCCAGCTCAGGAGGATATG
GTTATCTGCTAGAGCCACTGTGGTGGATTGGCATGTTGACTATGGTTGTTGGAGAATTTGCGAATTTTGTAGCTTACATC
TATGCTCCGGCTGTGCTTGTGACTCCCCTTGGAGCATTGAGTATTATTGTAAGTGCGGTTCTAGCACATTTCTTACTGAA
CGAGAAATTGCGGAGAATGGGAATACTAGGTTGTGTGCTTTGTATAGTGGGTTCCACCATCATAGTGCTTCATGCCCCTG
GTGAACATAGCATAAGCTCTGTGGAAGAGATTTGGGACTTGGCAACACAACCAGCTTTTCTTTTGTATACAGCTTCAGCA
ATAGCTGTGGTCCTGGCATTGGTGTTGTACTGTGAACCACGCTATGGGCAGAGTAATATGATGGTGTATATTGGCGTATG
TTCGATAAATGGTTCATTGACGGTTATGAGCGTCAAAGCAATAGGTATCGCCATAAAACTTACATTAGAGGGTTCAAGCC
AGGTGGCACGCTACCAAACCTGGATTTTTGTAATGGTAGCTGTTACATGTATTATCACTCAATTGAATTACTTAAACAAG
GCCTTGGATACATTTAACA




Most similar to sp|Q9JJC8|NIPA2_MOUSE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9JJC8|NIPA2_MOUSE Magnesium transporter NIPA2 OS=Mus musculus
           GN=Nipa2 PE=1 SV=1
          Length = 359

 Score =  181 bits (458), Expect = 7e-45
 Identities = 88/191 (46%), Positives = 123/191 (64%)
 Frame = +3

Query: 246 LLEPLWWIGMLTMVVGEFANFVAYIYAPAVLVTPLGALSIIVSAVLAHFLLNEKLRRMGI 425
           L E LWW G+L+M  GE ANF AY +APA LVTPLGALS++VSA+L+ + LNE+L   G 
Sbjct: 54  LKEWLWWAGLLSMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGK 113

Query: 426 LGCVLCIVGSTIIVLHAPGEHSISSVEEIWDLATQPAFLLYTASXXXXXXXXXXYCEPRY 605
           +GC+L I+GST++V+HAP E  I ++ E+      P F+++                PR+
Sbjct: 114 IGCLLSILGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVFATFVVIVALIFIFVVGPRH 173

Query: 606 GQSNMMVYIGVCSINGSLTVMSVKAIGIAIKLTLEGSSQVARYQTWIFVMVAVTCIITQL 785
           GQ+N++VYI +CS+ G+ +V  VK +GIAIK  L G   +     WI +   V C+ TQ+
Sbjct: 174 GQTNILVYITICSVIGAFSVSCVKGLGIAIKELLAGKPVLQHPLAWILLFSLVVCVSTQI 233

Query: 786 NYLNKALDTFN 818
           NYLN+ALD FN
Sbjct: 234 NYLNRALDIFN 244